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NL-TINR: implicit neural representation based nonlocal functional tensor decomposition for zero-shot 3D multi-contrast MRI reconstruction.

September 23, 2026pubmed logopapers

Authors

Xu J,Jia S,Yang Y,Ye Y,Liang J,Liu Y,Zhu Y

Affiliations (7)

  • Shenzhen Institute of Advanced Technology Chinese Academy of Sciences, No. 1068, Xueyuan Avenue, Nanshan District, Shenzhen, Guangdong, Shenzhen, Guangdong, 518055, China.
  • Institute of Biomedical and Health Engineering, Shenzhen Institute of Advanced Technology Chinese Academy of Sciences, 1068 Xueyuan Avenue, Shenzhen University Town, Shenzhen, Guangdong, 518055, China.
  • Shenzhen Institute of Advanced Technology Chinese Academy of Sciences, No. 1068, Xueyuan Avenue, Nanshan District, Shenzhen, Guangdong, shenzhen, shenzhen, guangdong, 518055, China.
  • United Imaging Healthcare Europe, Wilhelminakade 318, 3072 AR Rotterdam, Netherlands, Rotterdam, 3072 AR, Netherlands.
  • Shenzhen Bao'an District Songgang People's Hospital, No. 2 Shajiang Road, Songgang Street, Bao'an District, Shenzhen, China, Shenzhen, Guangdong, 518105, China.
  • Paul C. Lauterbur Research Center for Biomedical Imaging, Shenzhen Institute of Advanced Technology Chinese Academy of Sciences, 1068 Xueyuan Avenue, Shenzhen University Town, Shenzhen, Guangdong, 518055, China.
  • Paul C. Lauterbur Research Center for Biomedical Imaging, Shenzhen Institute of Advanced Technology Chinese Academy of Sciences, No. 1068, Xueyuan Avenue, Nanshan District, Shenzhen, Guangdong, shenzhen, Shenzhen, Guangdong, 518055, China.

Abstract

3D quantitative magnetic resonance imaging (qMRI) enables noninvasive tissue characterization but often requires prolonged acquisition times for multi-contrast imaging, limiting its broader clinical adoption. Although deep learning has shown promise for accelerated MRI reconstruction, supervised methods rely on large-scale fully sampled 3D datasets that are difficult to obtain. Existing implicit neural representation (INR)-based self-supervised methods avoid this requirement but can exhibit spectral bias, potentially leading to over-smoothed image details. We propose NL-TINR, a zero-shot self-supervised reconstruction framework that integrates patch-based nonlocal self-similarity (NSS) with INR-based functional tensor decomposition. The NSS prior groups structurally similar image patches into high-dimensional tensors to explicitly exploit nonlocal redundancy and suppress aliasing artifacts while preserving fine anatomical textures. Meanwhile, INRs parameterize the tensor factor functions, providing a compact and flexible representation that captures correlations across spatial and contrast dimensions while reducing the burden of directly modeling the full 3D multi-contrast volume. Extensive experiments on 3D multi-echo MRI datasets demonstrate that NL-TINR consistently outperforms the compared reconstruction methods, providing improved artifact suppression and anatomical detail preservation, particularly at high acceleration factors. NL-TINR eliminates the dependence on fully sampled training data while effectively exploiting nonlocal structural redundancy and high-dimensional spatial-contrast correlations, providing a practical zero-shot framework for high-fidelity 3D multi-contrast qMRI reconstruction.

Topics

Journal Article

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